Tag

Exome Sequencing

All articles tagged with #exome sequencing

Exome sequencing of 44,028 British South Asians uncovers thousands of rare knockouts and novel gene–phenotype links
genetics14 days ago

Exome sequencing of 44,028 British South Asians uncovers thousands of rare knockouts and novel gene–phenotype links

Sequencing 44,028 British Pakistani/Bangladeshi volunteers with high autozygosity creates a large South Asian exome resource linked to health records, identifying ~4.7 million variants, 2,991 genes with rare biallelic loss-of-function genotypes (546 novel), and over 100 newly linked gene–phenotype associations. Meta-analysis with UK Biobank reinforced cardiometabolic signals, and analyses of recessive burdens and human knockouts illustrate how knockout genotypes can inform drug target safety and efficacy, aiding disease interpretation and guiding drug development. Data and code are publicly available via cloud and GitHub.

Unveiling New Breast Cancer Genes: Exome Sequencing and Blood Test Reveal Significant Risk Factors
medical-research2 years ago

Unveiling New Breast Cancer Genes: Exome Sequencing and Blood Test Reveal Significant Risk Factors

A meta-analysis of three large whole-exome sequencing datasets identified associations between protein-truncating variants (PTVs) and breast cancer risk for six known susceptibility genes (ATM, BRCA1, BRCA2, CHEK2, PALB2, and MAP3K1) at exome-wide significance. Associations were also observed for PTVs in LZTR1, ATR, and BARD1. Additionally, associations between predicted deleterious rare missense or PTVs and breast cancer were identified for CDKN2A at exome-wide significance. The overall contribution of coding variants in genes beyond the previously known genes is estimated to be small.